Insertion junction: CLIP2.020474_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020474
Chromosome:chromosome 17
Location:3172585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721000 ABCA5 (1 of 2) PTHR19229//PTHR19229:SF127 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA // SUBFAMILY NOT NAMED; ABC transporter 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGTGCTGATGGCGCGTCCCCTACCTGGCTTAGGCTCTGACACGCCCG
Internal bar code:TCTTTGGATATGCACGCCTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2412
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGTACACACAAGCCGTA
Suggested primer 2:ATCTTCTTCTGCGTGCTGCT