Insertion junction: CLIP2.020477_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020477
Chromosome:chromosome 12
Location:9458711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540850 (1 of 1) IPR009031 - Carbohydrate binding module family 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGCCATCGGTTCTGGCCGCTGCTGCACGTCACGGGCGGCCACGTAGC
Internal bar code:GTAGTGGTACAGGGGTCTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:332
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGACATCCACTGACCAGCAC
Suggested primer 2:CGTCCACGCCCACTATCTAC