Insertion junction: CLIP2.020478_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020478
Chromosome:chromosome 12
Location:6992100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560800 (1 of 2) K14664 - IAA-amino acid hydrolase [EC:3.5.1.-] (ILR1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGGTGGTGGCAAGAAGGACGTATGTCAGTCCCCTTACTTCATGATC
Internal bar code:TACAAACGATATGATAGCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3991
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:GGGACGGGGTGAACTTCATT
Suggested primer 2:ACACTCGGGGATACAGCTCT