Insertion junction: CLIP2.020481_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020481
Chromosome:chromosome 14
Location:1080190
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614450 Hypothetical protein; (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCACTGTCTCTATCTCTGCCTCTGCCCACTGCCTTTGTCTCTGTCT
Internal bar code:CGATTACCAACTCAACCTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1568
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAAACCCAGATGCGCAAA
Suggested primer 2:TGTCGGGTGTCTAGATCCGT