Insertion junction: CLIP2.020484_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020484
Chromosome:chromosome 12
Location:8140999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552150 (1 of 1) PF00069//PF13185 - Protein kinase domain (Pkinase) // GAF domain (GAF_2) CDS
lncRNA_TCONS_00120808 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAGCGCTGTTCCATCACTTTGTGGGGTCCACCGGTCTCGCCGTCCAGC
Internal bar code:TATCGCTCGCACAACCTCCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:917
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTGCTACATGTGCGTGT
Suggested primer 2:TCGCGATTTGTTCTTCCCGA