Insertion junction: CLIP2.020485_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020485
Chromosome:chromosome 11
Location:388981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467581 (1 of 1) PTHR10071:SF177 - GATA-LIKE TRANSCRIPTION FACTOR ELT-6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGAACATGAAGAGGCGGCGATAAGGTGCATAGCAGACGATGAGCTAA
Internal bar code:TTAGTATGCAAGGGCTGCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2926
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACCACATACCTGCAACC
Suggested primer 2:CATAGTTTGGCTGCATGGGC