Insertion junction: CLIP2.020498_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020498
Chromosome:chromosome 13
Location:2130082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577450 GPA3 (1 of 1) 1.1.5.3 - Glycerol-3-phosphate dehydrogenase / sn-glycerol-3-phosphate dehydrogenase; Glycerol-3-phosphate acyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGGATGGTGGGCCTTGTGCCGAAAGGGGCCGGCCGGGTGTGTTAAA
Internal bar code:AAGTTCGTTTAGTGATGCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:319
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACCTGTGTGTGTTTGGT
Suggested primer 2:TGATGTGGGTTGGAAGAGGC