Insertion junction: CLIP2.020499_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020499
Chromosome:chromosome 5
Location:2450555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238900 HEL25 (1 of 1) K14779 - ATP-dependent RNA helicase DDX52/ROK1 [EC:3.6.4.13] (DDX52, ROK1); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCTGCCAGGGTTGGGCCCAGCAGAATTGCTTGGCGCTCGGCGCTCAG
Internal bar code:AGGGGTGAATCGGACGCTGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1354
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTCTGTCTCCCTCTGAT
Suggested primer 2:GCTTCATGGAGCAGGTGAGT