Insertion junction: CLIP2.020502_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020502
Chromosome:chromosome 2
Location:7470392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392430 (1 of 1) 1.1.1.62 - 17-beta-estradiol 17-dehydrogenase / Estrogen 17-oxidoreductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCCCTACCGCTCCTTCGCCCTTCCTACCCCTCCCCACCGGCCAGATC
Internal bar code:AAGCGCTTTTTTAGGTTAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2468
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGGTTGGTTTCCACGTC
Suggested primer 2:CGCCACCAAGTCCTTCATCT