Insertion junction: CLIP2.020503_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020503
Chromosome:chromosome 9
Location:6479730
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g415400 (1 of 1) PF08314 - Secretory pathway protein Sec39 (Sec39) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTGCACGCGCAGTGGCAGCTACAGCAACCCGGTCTATGCTGTCCCCT
Internal bar code:GCTAACGTATGTTAATCCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:503
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGCTCGATGCCCAAGTC
Suggested primer 2:GCACCATGAAGGCAGAGCTA