Insertion junction: CLIP2.020507_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020507
Chromosome:chromosome 3
Location:4307150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174200 (1 of 9) IPR000210//IPR011042//IPR011333 - BTB/POZ domain // Six-bladed beta-propeller, TolB-like // POZ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTACGGGTCGAATCTACCACGGCACTCACCAGACGCCGCCTGTTGCTG
Internal bar code:CCTAAATTTATTTTGAAGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1233
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGCAGCTTCCATGAAGG
Suggested primer 2:CGATCCACAGCAGCATTTCG