Insertion junction: CLIP2.020507_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020507
Chromosome:chromosome 16
Location:4372090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668650 (1 of 1) PTHR34204//PTHR34204:SF2 - FAMILY NOT NAMED // RNA-BINDING ASCH DOMAIN PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAAGGTAGCCATATGAAGCCTCATCCACATTGCCCCAACCCACCCCTG
Internal bar code:CCACGATCAAGCGACAGGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1136
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGAGTGGATTAAACAGCG
Suggested primer 2:ATGTGCATTACCACTGCCGA