Insertion junction: CLIP2.020523_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020523
Chromosome:chromosome 8
Location:247234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358563 (1 of 1) PTHR18934:SF85 - FI05376P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACCCCCACTCCGGCCGTCCCGCCCTTCACCGACACGGTGCCGGCTTT
Internal bar code:ATTGCCTTGGCTTACCTGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1626
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCTATCGCGCAACTTTGTCG
Suggested primer 2:TCCGGGGATGGGACTATTGT