Insertion junction: CLIP2.020530_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020530
Chromosome:chromosome 7
Location:1560581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324866 (1 of 2) IPR000104//IPR000719//IPR001245//IPR011009 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGCGCTGTGTTTCTGGCATGGGACGCGCTGTGTTTCTGGCATGGGA
Internal bar code:TGTTATTTCAGTCTCTGAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3319
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTGGAGAGTGCCAGCAG
Suggested primer 2:TAGCTGCGTGACCACAACAT