Insertion junction: CLIP2.020535_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020535
Chromosome:chromosome 14
Location:575771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611700 PLAP8,PLP8 Plastid lipid associated protein 8; (1 of 1) PF01476//PF04755 - LysM domain (LysM) // PAP_fibrillin (PAP_fibrillin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAACTCCTCACCACCTGCTCCCCACTCACAAGCCGCCACGCAACTCC
Internal bar code:CTCTATGCGCAATTGGGATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1405
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCTAGCCGCCCTAAAGA
Suggested primer 2:TGTGTGTGTACGGAGCAGAC