Insertion junction: CLIP2.020538_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020538
Chromosome:chromosome 8
Location:3543755
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379300 (1 of 1) PTHR12459//PTHR12459:SF6 - UNCHARACTERIZED // TRANSMEMBRANE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTGGAGCTGGAGCTCGAGCTCGAGCTGGAGCCAGGAGCTGGTCGACA
Internal bar code:TTGTATGGCTCTCTTAGATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:153
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGGAGGCTGAACGAAT
Suggested primer 2:GGTGGTAAAGGGTGGTAGCC