Insertion junction: CLIP2.020540_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020540
Chromosome:chromosome 12
Location:396395
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g495401 POC12 (1 of 15) PTHR12291:SF23 - PROTEIN MEC-15 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGTGAGTGCCAGTTCGTTTACATACGGAGGCCCATGCCCGGCAGAGC
Internal bar code:GTAGCCTTTTGGGGTATCTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTGTCCCTCTTCCCAAG
Suggested primer 2:GGCACCGTCCAAAACAACTC