Insertion junction: CLIP2.020540_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020540
Chromosome:chromosome 12
Location:396399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g495401 POC12 (1 of 15) PTHR12291:SF23 - PROTEIN MEC-15 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCACTGCTGACAAGGGAAGACGCCGCCGGAGACTCCACCTTGGGCCCT
Internal bar code:GTAGCCTTTTGGGGTATCTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3687
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACCGTCCAAAACAACTC
Suggested primer 2:CAGCTGTCCCTCTTCCCAAG