Insertion junction: CLIP2.020543_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020543
Chromosome:chromosome 9
Location:1813383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398051 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTTGGGGCGTGGAGGTGGAAGCAGTGGCAGTAGCAGCGGTGGTGCGG
Internal bar code:TAGCTACAGAATTTGCTAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1897
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTACTGCTCGTGCCTCCT
Suggested primer 2:TCATGCAGCCTACCAGCATC