Insertion junction: CLIP2.020551_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020551
Chromosome:chromosome 17
Location:1815167
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709250 (1 of 1) PTHR23137:SF3 - VESICLE TRANSPORT PROTEIN SFT2C CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGATTCATCCAGCTTCGTGGCTTCAAACAGCAGCTCACGCACATGAT
Internal bar code:GGTTAATTTAAGGTTGTACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3865
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGCCGACTAGGACATAC
Suggested primer 2:TGTTAGCCGACTGGAACACC