Insertion junction: CLIP2.020556_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020556
Chromosome:chromosome 13
Location:3850108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAGGAGACCCTGAGCTATGTGAGCGACGTGGAGTGCTCGGCAGTCTT
Internal bar code:ACCGGTTCTCAAGGCATTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:6129
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAGGACGTAGGTCACCT
Suggested primer 2:CGGACTACGGATCTGACACG