Insertion junction: CLIP2.020557_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020557
Chromosome:chromosome 12
Location:3296611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499100 (1 of 2) PF01465 - GRIP domain (GRIP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCTGCGCCACTCACCTTGATCAGCAGCTGCGCCCGCACCTCCCGCGC
Internal bar code:GATCTCATTGCGGGTAGCTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2297
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACCGTTGCATCCTCCTT
Suggested primer 2:CCGCTCAGTGGTCTTGCTAA