Insertion junction: CLIP2.020561_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020561
Chromosome:chromosome 2
Location:1410892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g083354 (1 of 1) K05656 - ATP-binding cassette, subfamily B (MDR/TAP), member 9 (ABCB9, TAPL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACCGGACCACCCCTCCCTGCACCATCCCACCCCCCTTTCGCTACACT
Internal bar code:TCCTAATGTTCTTGCCGACGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:382
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCACACACGCTTCGTTTCTT
Suggested primer 2:ACTTTGCTTGGCTTGGCATG