Insertion junction: CLIP2.020562_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020562
Chromosome:chromosome 7
Location:3378832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335100 (1 of 5) IPR011051//IPR013096 - RmlC-like cupin domain // Cupin 2, conserved barrel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGAGCAGCGGCGGAGTGAGTACGGCACGAGGGAAGGAAACATGTGTA
Internal bar code:CGAGTAGCAGCTATTGCAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3648
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:64
LEAP-Seq n unique pos:128

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTATGCAGCCTTTCGTCG
Suggested primer 2:TTGTCACAGTCCGTCAGTCG