Insertion junction: CLIP2.020562_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020562
Chromosome:chromosome 7
Location:3378835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335100 (1 of 5) IPR011051//IPR013096 - RmlC-like cupin domain // Cupin 2, conserved barrel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGCCGCGCTGCAGGTTCATGTTCTTTGAGGTGGGTAAGGCGGTGCCG
Internal bar code:AGTATAGGGCCTACAAATCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4831
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCACAGTCCGTCAGTCG
Suggested primer 2:CGTTATGCAGCCTTTCGTCG