Insertion junction: CLIP2.020563_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020563
Chromosome:chromosome 2
Location:322120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075150 RPB2 (1 of 1) K03010 - DNA-directed RNA polymerase II subunit RPB2 (RPB2, POLR2B); DNA-directed RNA polymerase II, 135 kDa polypeptide intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACTTGAGCGCACACGGCCCTCTCACGCCGCCCCGACATAGGTGGGAT
Internal bar code:ATAATCATTTCGCGCACGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1238
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATGCATCACAACCAGCG
Suggested primer 2:TGATTCAGCCCTCAGTGCAG