Insertion junction: CLIP2.020564_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020564
Chromosome:chromosome 12
Location:5605094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531200 FOX2 Multicopper ferroxidase; (1 of 2) K14735 - hephaestin (HEPH) 3'UTR
Cre12.g531250 (1 of 1) K00480 - salicylate hydroxylase (E1.14.13.1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACTGATGCGCGACATGCCTCGCTGCTTAGGCGAGACCTCTTGCCTACG
Internal bar code:TCCGTAGTCCACAGTTTTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2279
LEAP-Seq percent confirming:78.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGCAGCAACTGTGTGAG
Suggested primer 2:AACGACACAATGGTCTCCCC