Insertion junction: CLIP2.020574_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020574
Chromosome:chromosome 2
Location:7193474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800258 CDS
lncRNA_TCONS_00137361 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCCGGTGCTGGCGCCGTTCACAAGAGTCCGTGCGCGCCGCCGCCACC
Internal bar code:TAGAGCGTTTCTGACCCCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2233
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACACATGCTCTGCTTCTGCT
Suggested primer 2:ACTGGGTGTAGTGCTGCATC