Insertion junction: CLIP2.020579_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020579
Chromosome:chromosome 5
Location:1105696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248100 ANK1 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAAAACGCTCATTTCAGCTGCGCTCTCCTCAGTGCCTCTCCTCTCAC
Internal bar code:CGGCCGACCAGTAGAGATATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1715
LEAP-Seq percent confirming:98.6842
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGTCGTGAAACTCGCC
Suggested primer 2:CTGCTACACGTGCGCATTAC