Insertion junction: CLIP2.020583_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020583
Chromosome:chromosome 7
Location:5180298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g348750 (1 of 2) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGAGGCGCGGGACGCGGGCGACGGCGTCAGCCTCGCACTTCATGCG
Internal bar code:ATTATCGCTCACTGGAAGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2817
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:AACCGAATGTCCGCCAGAAT
Suggested primer 2:GTTTGGCCATTGAGCAGGTG