Insertion junction: CLIP2.020590_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020590
Chromosome:chromosome 6
Location:2426876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268800 FLA17,IFT139,FAP60 Intraflagellar transport protein 139; (1 of 1) PTHR14699//PTHR14699:SF0 - STI2 PROTEIN-RELATED // TETRATRICOPEPTIDE REPEAT PROTEIN 21 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTTTGCGGGTTTCCGGACGACCGTAATCATGCCTGGAACTTCCCTCCC
Internal bar code:CCAACAAGTTACTGGAAACTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:460
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATCCCCCACCATCTCAT
Suggested primer 2:GACATGATAAGGGAGGGGCG