Insertion junction: CLIP2.020591_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020591
Chromosome:chromosome 10
Location:489180
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421021 (1 of 25) IPR001005//IPR009057//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGGGTGCACTTGCACGCGTGCACTCCTCGGCGCCAACAGGAGCAGCA
Internal bar code:ATCGGAATCTGGTGCCTCAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4900
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CATCATCAAAGTGCGGCTCG
Suggested primer 2:CAGCAGTGCTCTCTACTCGG