Insertion junction: CLIP2.020598_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020598
Chromosome:chromosome 16
Location:4679269
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667350 CAV6 (1 of 2) PF00520//PF08016//PF16905 - Ion transport protein (Ion_trans) // Polycystin cation channel (PKD_channel) // Voltage-dependent L-type calcium channel, IQ-associated (GPHH); Voltage-gated Ca2+ channel, alpha subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGAAGACGCACGAGCAGGACGCCTGGCGCCTGACGCCGCAGGTGCGC
Internal bar code:GGGCTATCTAACCACCTTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:466
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGACCAGAGAGGCAGAG
Suggested primer 2:CGACGTGTTGTGCGTTTCTT