Insertion junction: CLIP2.020602_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020602
Chromosome:chromosome 7
Location:1562407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324866 (1 of 2) IPR000104//IPR000719//IPR001245//IPR011009 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGGGGTGACAGCACCTGCATGGATGGGGGTGACAGCACCTGCATGGA
Internal bar code:CCGTGCTGATCTGATGAACAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1678
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGATATTCACCCTCGCCGAG
Suggested primer 2:GTCCGATCCATACCCAGCAG