Insertion junction: CLIP2.020607_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020607
Chromosome:chromosome 17
Location:5207753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g737084 (1 of 1) PTHR15863//PTHR15863:SF2 - FAMILY NOT NAMED // UPF0544 PROTEIN C5ORF45 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATATCGGCGGCCCAGCCGTCAGCGCCGTACGCCGCTGCGCGTGGCGC
Internal bar code:TTGGGCAACATCAGGCATCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5161
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGTAAGGGTGGAGTGTC
Suggested primer 2:GAATCCGAGAGCTCCGATGG