Insertion junction: CLIP2.020610_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020610
Chromosome:chromosome 3
Location:2574935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160000 HDA3 (1 of 3) PTHR10625//PTHR10625:SF102 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 10; RPD3/HDA1 type histone deacetylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTACTGTGTGTTCATGCATGTATGGTAGCCTGGCGTGTGCGTGTGGGG
Internal bar code:CTACGAACATGTCTAATTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1959
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATTGAGACACGTGCTGA
Suggested primer 2:CGACTCTTACGGGGATGACG