Insertion junction: CLIP2.020610_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020610
Chromosome:chromosome 4
Location:1934982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218550 (1 of 3) PTHR15535//PTHR15535:SF23 - TRANSMEMBRANE PROTEIN 2-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTTCCTGGGCTGGTATGAGTTTGAGTTCCTATGCCAGTCCCGCATCG
Internal bar code:TTAATCGGATGACAAAAATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2344
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCGTACAGCTGGGTGAC
Suggested primer 2:CTCCTTCTACGCTGCCCAAA