Insertion junction: CLIP2.020613_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020613
Chromosome:chromosome 12
Location:723043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g492750 (1 of 5) 3.2.1.1 - Alpha-amylase / Glycogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGTAACCTCGTGACGTTGCTTTGCTTGCTGCGTGCAGGCTGCCCAGG
Internal bar code:GGACGACTTAGCCTAGAGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2923
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGTCAAACTGTCCCAAC
Suggested primer 2:TCACCAGTGCTAACCGAACC