Insertion junction: CLIP2.020618_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020618
Chromosome:chromosome 16
Location:5386607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683100 (1 of 239) IPR016024 - Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGCGCCTGGCCCCCATCTCAGGCCGGCATCCCCCGGCTCGCAGCGGAG
Internal bar code:GCAACAACGACTATACGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1217
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTGGTACCCTGTCTGAA
Suggested primer 2:AATGGCCACCACCAATGACT