Insertion junction: CLIP2.020626_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020626
Chromosome:chromosome 2
Location:5379439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800236 (1 of 2) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTATACGTGGCAGGGGTCGGCCTGCCGATGCGGTTCGGCGGTTGCCG
Internal bar code:CAAGTACGGGTCAAGGCCCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5252
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCGAACTTGTCCACAAC
Suggested primer 2:GATTGAGTTTGGCGCGCTAG