Insertion junction: CLIP2.020627_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020627
Chromosome:chromosome 10
Location:3023953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440700 (1 of 1) PTHR13343:SF17 - CELLULAR REPRESSOR OF E1A-STIMULATED GENES, ISOFORM A CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCGCGGGCACAGGCGGGATCCTCGGGATCCAACGCACCGCATGGCC
Internal bar code:GTCTCGCCAACCTTCATATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3313
LEAP-Seq percent confirming:92.1569
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TTATCTCACGCCGATGGACG
Suggested primer 2:TCTGCACACGTCCCAAGTAC