Insertion junction: CLIP2.020633_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020633
Chromosome:chromosome 16
Location:3258374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g666100 (1 of 1) K14168 - cytoplasmic tRNA 2-thiolation protein 1 (CTU1, NCS6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGGCACCGCAAGGTCCGTGCCCTCACTCACCTTGAGCGGAATGCCGT
Internal bar code:TCATGATTTAAGAATTTTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGCGCGATACAAGTGAG
Suggested primer 2:TACGCGTACTTGAACGGCTT