Insertion junction: CLIP2.020635_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020635
Chromosome:chromosome 9
Location:3157054
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394362 (1 of 2) IPR000104//IPR001005//IPR009057 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTACCTGCGAGACCCATGGCCAGCGCAGCAGTGCTTGCCCAGGCCGCCA
Internal bar code:TTGTAGCCAAGCGACACGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2165
LEAP-Seq percent confirming:99.2308
LEAP-Seq n confirming:129
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCACCCAGTCTCTGAGAC
Suggested primer 2:CGCTTCAGCTGCATATCGTG