Insertion junction: CLIP2.020638_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020638
Chromosome:chromosome 1
Location:2793254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017150 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGGCAGCAGCAGCAGCAGTGGCCGTGGTGGCAGCAGTAGCAGCGGTG
Internal bar code:TATGCTTAAGTTTGGTACTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1699
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AATAAAAGGTGGTGCCCGGT
Suggested primer 2:CTGGAGTGTGAGCTCTGTGG