Insertion junction: CLIP2.020647_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020647
Chromosome:chromosome 6
Location:2830563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272000 (1 of 1) PTHR10281//PTHR10281:SF1 - MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED // VACUOLE MEMBRANE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAGGTGGGGACTGGGGAGGAGAGGAGGCATGACAGCATGGGGCGGGC
Internal bar code:ATCGGCCCCATCGAGACGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1588
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCCACAAAACGCAGAC
Suggested primer 2:TCTGGAAGTTCTTCGGTGCC