Insertion junction: CLIP2.020647_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020647
Chromosome:chromosome 6
Location:2830582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272000 (1 of 1) PTHR10281//PTHR10281:SF1 - MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED // VACUOLE MEMBRANE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTGATCCAGGCGTGCAGCTCGTGCGCCGGCGACAGCGACGCCGCGGC
Internal bar code:ATCGGCCCCATCGAGACGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1377
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGAAGTTCTTCGGTGCC
Suggested primer 2:CAGCTCCACAAAACGCAGAC