Insertion junction: CLIP2.020655_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020655
Chromosome:chromosome 10
Location:5690688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459300 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCTCCCAAGCTCTGGGCAACGTGCAACTTGCAGCAACCTTCCTCGTG
Internal bar code:GTGACGCACAAAGCGTGATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1243
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGATGGATTCAGGCCCAC
Suggested primer 2:CATGGCAGGCTGTATCGGAT