Insertion junction: CLIP2.020657_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020657
Chromosome:chromosome 10
Location:1760375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430501 (1 of 1) PTHR22904//PTHR22904:SF331 - TPR REPEAT CONTAINING PROTEIN // CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN 3'UTR
Cre10.g801118 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTATATTTGTTCGGGCAGAACTGTGAGGCAGGGTGGAGTACGGTATTC
Internal bar code:GCAGGGTAGGTTCGCCGAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:501
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCAGCTGTAGAACACGT
Suggested primer 2:CGACGCACGTGTTGTTTCTT