Insertion junction: CLIP2.020662_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020662
Chromosome:chromosome 7
Location:2952583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332901 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACGCAGTGTTCAACCCGCTCAACGTGGAGGTGTTGGCCCGGCGGCTG
Internal bar code:ACCGGGTGGTAGTCACCAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4551
LEAP-Seq percent confirming:98.7805
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTCAGCACGATTGAACA
Suggested primer 2:CTGACAACAGCTCATCCCGT