Insertion junction: CLIP2.020668_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020668
Chromosome:chromosome 7
Location:5008366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347400 (1 of 2) K11135 - Pin2-interacting protein X1 (PINX1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACGGGTTTCCGTGAGCAGGACCAGGAGAACCTGTACGAGCAGGTGCG
Internal bar code:TTATGTCGCGTGTTTTAGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3308
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTGGTTACCAGGGCGAG
Suggested primer 2:CGACGAGGAGGATGAAGAGC